Transcript: lnc-TMEM185B-1:5

Basic information

LNCipedia transcript ID: lnc-TMEM185B-1:5 
LNCipedia gene ID: lnc-TMEM185B-1
Location (hg38): chr2:120217333-120232382
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 9496 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224789.1|MICT00000197911.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5725.3763 coding 
CPAT coding probability 99.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM185B-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM185B-1:5
5.0 lnc-TMEM185B-1:5
5.1 lnc-SCTR-3:2
5.2 lnc-TMEM185B-1:5