Transcript: lnc-TMEM189-UBE2V1-4:14

Basic information

LNCipedia transcript ID: lnc-TMEM189-UBE2V1-4:14 
LNCipedia gene ID: lnc-TMEM189-UBE2V1-4
Location (hg38): chr20:50095790-50113125
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 649 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT080265
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.3626 non-coding 
CPAT coding probability 7.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM189-UBE2V1-4:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM189-UBE2V1-4:14
4.0 lnc-TMEM189-UBE2V1-4:14
4.1 lnc-TMEM189-UBE2V1-4:14
5.0 lnc-TMEM189-UBE2V1-4:14
5.1 lnc-SPATA2-4:13
5.2 lnc-TMEM189-UBE2V1-4:14