Transcript: lnc-TMEM206-5:14

Basic information

LNCipedia transcript ID: lnc-TMEM206-5:14 
LNCipedia gene ID: lnc-TMEM206-5
Location (hg38): chr1:212284244-212285255
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1012 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA143:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -253.9347 non-coding 
CPAT coding probability 1.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM206-5:14 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TMEM206-5:14
4.1 lnc-TMEM206-5:14
5.0 lnc-TMEM206-5:14
5.1 lnc-IRF6-44:1
5.2 lnc-TMEM206-5:14