Transcript: lnc-TMEM206-5:15

Basic information

LNCipedia transcript ID: lnc-TMEM206-5:15 
LNCipedia gene ID: lnc-TMEM206-5
Location (hg38): chr1:212225413-212285081
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 261 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226251.1|FTMT20100076495.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -198.7626 non-coding 
CPAT coding probability 4.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM206-5:15 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM206-5:15
5.0 lnc-TMEM206-5:15
5.1 lnc-IRF6-44:3
5.2 lnc-TMEM206-5:15