Transcript: lnc-TMEM211-2:1

Basic information

LNCipedia transcript ID: lnc-TMEM211-2:1 
LNCipedia gene ID: lnc-TMEM211-2
Location (hg38): chr22:25102440-25112692
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 950 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000366110.3; CTA-221G9.11-001; OTTHUMT00000320506.2
Alternative gene names: ENSG00000203280.3; CTA-221G9.11; OTTHUMG00000150908.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.9184 non-coding 
CPAT coding probability 6.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM211-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM211-2:1
4.0 lnc-TMEM211-2:1
4.1 lnc-TMEM211-2:1
5.0 lnc-TMEM211-2:1
5.1 lnc-PITPNB-65:7
5.2 lnc-TMEM211-2:1