Transcript: lnc-TMEM229A-2:3

Basic information

LNCipedia transcript ID: lnc-TMEM229A-2:3 
LNCipedia gene ID: lnc-TMEM229A-2
RefSeq ID: NR_110180
Location (hg38): chr7:124337380-124352096
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 564 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110180; NR_110180.1
Alternative gene names: LOC101928211


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.9745 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM229A-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM229A-2:3
4.0 lnc-TMEM229A-2:3
4.1 lnc-TMEM229A-2:3
5.0 lnc-TMEM229A-2:3
5.1 lnc-RNF133-12:2
5.2 lnc-TMEM229A-2:3