Transcript: lnc-TMEM231-1:1

Basic information

LNCipedia transcript ID: lnc-TMEM231-1:1 
LNCipedia gene ID: lnc-TMEM231-1
Ensembl Gene ID: ENSG00000259992
Ensembl Transcript ID: ENST00000564489
Location (hg38): chr16:75541399-75608445
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 798 bp
Exons: 8
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564489.1; RP11-77K12.8-001; OTTHUMT00000435491.1
Alternative gene names: ENSG00000259992.1; RP11-77K12.8; OTTHUMG00000177133.1; AC025287.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.8837 non-coding 
CPAT coding probability 96.74% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM231-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM231-1:1
4.0 lnc-TMEM231-1:1
4.1 lnc-TMEM231-1:1
5.0 lnc-TMEM231-1:1
5.1 lnc-MLKL-37:1
5.2 lnc-TMEM231-1:1