Transcript: lnc-TMEM238-1:1

Basic information

LNCipedia transcript ID: lnc-TMEM238-1:1 
LNCipedia gene ID: lnc-TMEM238-1
Ensembl Gene ID: ENSG00000269275
Ensembl Transcript ID: ENST00000595064
Location (hg38): chr19:55377579-55378125
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 547 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068031; ENST00000595064.1
Alternative gene names: ENSG00000269275.1; CTD-2105E13.15; AC020922.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.2303 non-coding 
CPAT coding probability 81.93% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMEM238-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM238-1:1
4.0 lnc-TMEM238-1:1
4.1 lnc-TMEM238-1:1
5.0 lnc-TMEM238-1:1
5.1 lnc-SYT5-14:1
5.2 lnc-TMEM238-1:1