Transcript: lnc-TMEM238L-16:1

Basic information

LNCipedia transcript ID: lnc-TMEM238L-16:1 
LNCipedia gene ID: lnc-TMEM238L-16
Ensembl Gene ID: ENSG00000284876
Ensembl Transcript ID: ENST00000643787
Location (hg38): chr17:10794906-10838094
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1400 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000643787.1
Alternative gene names: ENSG00000284876.1; AC015908.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -218.4084 non-coding 
CPAT coding probability 11.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM238L-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GAS7-16:1
5.1 lnc-GAS7-16:1
5.2 lnc-TMEM238L-16:1