Transcript: lnc-TMEM242-8:1

Basic information

LNCipedia transcript ID: lnc-TMEM242-8:1 
LNCipedia gene ID: lnc-TMEM242-8
Ensembl Gene ID: ENSG00000271265
Ensembl Transcript ID: ENST00000604082
Location (hg38): chr6:156774217-156774662
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 446 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT115695; ENST00000604082.1
Alternative gene names: ENSG00000271265.1; RP11-230C9.4; AL355297.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.5893 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM242-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM242-8:1
4.0 lnc-TMEM242-8:1
4.1 lnc-TMEM242-8:1
5.0 lnc-TMEM242-8:1
5.1 lnc-DYNLT1-25:1
5.2 lnc-TMEM242-8:1