Transcript: lnc-TMEM243-1:4

Basic information

LNCipedia transcript ID: lnc-TMEM243-1:4 
LNCipedia gene ID: lnc-TMEM243-1
Ensembl Gene ID: ENSG00000224046
Ensembl Transcript ID: ENST00000446309
Location (hg38): chr7:87151440-87152420
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 338 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000446309; ENST00000446309.1; AC005076.5-002; OTTHUMT00000334362.1
Alternative gene names: ENSG00000224046; AC005076.5; ENSG00000224046.1; OTTHUMG00000154197.1; AC005076.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -539.255 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM243-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C7orf23-1:1
3.1 lnc-C7orf23-1:1
4.0 lnc-C7orf23-1:1
4.1 lnc-C7orf23-1:1
5.0 lnc-C7orf23-1:1
5.1 lnc-PEX1-61:4
5.2 lnc-TMEM243-1:4