Transcript: lnc-TMEM250-3:2

Basic information

LNCipedia transcript ID: lnc-TMEM250-3:2 
LNCipedia gene ID: lnc-TMEM250-3
Location (hg38): chr9:136059599-136060415
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 817 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc004cjw_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.2169 non-coding 
CPAT coding probability 23.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM250-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf69-3:1
4.0 lnc-C9orf69-3:1
4.1 lnc-C9orf69-3:1
5.0 lnc-C9orf69-3:1
5.1 lnc-TMEM250-3:1
5.2 lnc-TMEM250-3:2