Transcript: lnc-TMEM258-2:2

Basic information

LNCipedia transcript ID: lnc-TMEM258-2:2 
LNCipedia gene ID: lnc-TMEM258-2
Location (hg38): chr11:61813503-61814649
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 574 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000545986.1; RP11-467L20.7-001; OTTHUMT00000398594.1; NONHSAT021710
Alternative gene names: ENSG00000256914.1; RP11-467L20.7; OTTHUMG00000168173.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.3028 non-coding 
CPAT coding probability 5.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM258-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf10-2:1
4.0 lnc-C11orf10-2:1
4.1 lnc-C11orf10-2:1
5.0 lnc-C11orf10-2:1
5.1 lnc-LTBP3-153:2
5.2 lnc-TMEM258-2:2