Transcript: lnc-TMEM259-5:1

Basic information

LNCipedia transcript ID: lnc-TMEM259-5:1 
LNCipedia gene ID: lnc-TMEM259-5
Location (hg38): chr19:1038727-1039064
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 338 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT060215; ENST00000585757.1
Alternative gene names: ENSG00000267020.1; AC011558.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -91.6635 non-coding 
CPAT coding probability 8.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM259-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C19orf6-5:1
4.0 lnc-C19orf6-5:1
4.1 lnc-C19orf6-5:1
5.0 lnc-C19orf6-5:1
5.1 lnc-ZNF77-122:1
5.2 lnc-TMEM259-5:1