Transcript: lnc-TMEM268-1:1

Basic information

LNCipedia transcript ID: lnc-TMEM268-1:1 
LNCipedia gene ID: lnc-TMEM268-1
Location (hg38): chr9:114658001-114659356
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 579 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016674; NONHSAT134399
Alternative gene names: XLOC_007528; linc-DEC1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.6479 non-coding 
CPAT coding probability 10.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM268-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C9orf91-1:2
3.1 lnc-C9orf91-1:2
4.0 lnc-C9orf91-1:2
4.1 lnc-C9orf91-1:2
5.0 lnc-C9orf91-1:2
5.1 lnc-PRPF4-38:2
5.2 lnc-TMEM268-1:1