Transcript: lnc-TMEM30B-1:12

Basic information

LNCipedia transcript ID: lnc-TMEM30B-1:12 
LNCipedia gene ID: lnc-TMEM30B-1
Location (hg38): chr14:61298164-61322818
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 805 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247287.2|ENST00000554086.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.8125 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM30B-1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM30B-1:12
5.0 lnc-TMEM30B-1:12
5.1 lnc-DHRS7-16:7
5.2 lnc-TMEM30B-1:12