Transcript: lnc-TMEM43-2:1

Basic information

LNCipedia transcript ID: lnc-TMEM43-2:1 
LNCipedia gene ID: lnc-TMEM43-2
Location (hg38): chr3:13937379-14082811
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 478 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT088329
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.5727 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM43-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPRXL-1:2
4.0 lnc-TPRXL-1:2
4.1 lnc-TPRXL-1:2
5.0 lnc-TPRXL-1:2
5.1 lnc-MKRN2-14:1
5.2 lnc-TMEM43-2:1