Transcript: lnc-TMPRSS15-25:1

Basic information

LNCipedia transcript ID: lnc-TMPRSS15-25:1 
LNCipedia gene ID: lnc-TMPRSS15-25
Location (hg38): chr21:20931033-21020332
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 895 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002ylf_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -68.6707 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMPRSS15-25:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMPRSS15-25:1
4.0 lnc-TMPRSS15-25:1
4.1 lnc-TMPRSS15-25:1
5.0 lnc-TMPRSS15-25:1
5.1 lnc-N6AMT1-61:2
5.2 lnc-TMPRSS15-25:1