Transcript: lnc-TMPRSS15-6:1

Basic information

LNCipedia transcript ID: lnc-TMPRSS15-6:1 
LNCipedia gene ID: lnc-TMPRSS15-6
Location (hg38): chr21:19276702-19284635
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 767 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029086; NONHSAT081328
Alternative gene names: XLOC_014016; linc-TMPRSS15-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.686 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMPRSS15-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMPRSS15-6:1
3.1 lnc-TMPRSS15-6:1
4.0 lnc-TMPRSS15-6:1
4.1 lnc-TMPRSS15-6:1
5.0 lnc-TMPRSS15-6:1
5.1 lnc-N6AMT1-68:1
5.2 lnc-TMPRSS15-6:1