Transcript: lnc-TMTC3-13:9

Basic information

LNCipedia transcript ID: lnc-TMTC3-13:9 
LNCipedia gene ID: lnc-TMTC3-13
Location (hg38): chr12:89352781-89353956
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1176 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271327.1|FTMT24800005131.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -549.2515 non-coding 
CPAT coding probability 63.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TMTC3-13:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMTC3-13:9
5.0 lnc-TMTC3-13:9
5.1 lnc-TMTC3-13:9
5.2 lnc-TMTC3-13:9