Transcript: lnc-TMTC3-20:1

Basic information

LNCipedia transcript ID: lnc-TMTC3-20:1 
LNCipedia gene ID: lnc-TMTC3-20
Location (hg38): chr12:89731368-89735130
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3763 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000009861.1|FTMT24800005156.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.8817 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMTC3-20:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMTC3-20:1
5.0 lnc-TMTC3-20:1
5.1 lnc-TMTC3-20:1
5.2 lnc-TMTC3-20:1