Transcript: lnc-TMTC3-5:8

Basic information

LNCipedia transcript ID: lnc-TMTC3-5:8 
LNCipedia gene ID: lnc-TMTC3-5
Location (hg38): chr12:89919638-90112969
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5823 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258216.1|MICT00000083692.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -104.6264 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMTC3-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMTC3-5:8
5.0 lnc-TMTC3-5:8
5.1 lnc-TMTC3-5:8
5.2 lnc-TMTC3-5:8