Transcript: lnc-TMTC4-1:2

Basic information

LNCipedia transcript ID: lnc-TMTC4-1:2 
LNCipedia gene ID: lnc-TMTC4-1
Location (hg38): chr13:100535741-100580117
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2372 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT034968; ENST00000454752.2
Alternative gene names: ENSG00000224356.3; RP11-151A6.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.8163 non-coding 
CPAT coding probability 6.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMTC4-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMTC4-1:2
4.0 lnc-TMTC4-1:2
4.1 lnc-TMTC4-1:2
5.0 lnc-TMTC4-1:2
5.1 lnc-IRS2-40:3
5.2 lnc-TMTC4-1:2