Transcript: lnc-TMUB2-1:2

Basic information

LNCipedia transcript ID: lnc-TMUB2-1:2 
LNCipedia gene ID: lnc-TMUB2-1
Ensembl Gene ID: ENSG00000260793
Ensembl Transcript ID: ENST00000588279
Location (hg38): chr17:44221401-44222814
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 569 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT053923; ENST00000588279.1
Alternative gene names: ENSG00000260793.2; RP5-882C2.2; AC003102.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMUB2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMUB2-1:2
4.0 lnc-TMUB2-1:2
4.1 lnc-TMUB2-1:2
5.0 lnc-TMUB2-1:2
5.1 lnc-DHX8-16:8
5.2 lnc-TMUB2-1:2