Transcript: lnc-TMUB2-1:5

Basic information

LNCipedia transcript ID: lnc-TMUB2-1:5 
LNCipedia gene ID: lnc-TMUB2-1
Location (hg38): chr17:44198823-44223690
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1337 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA577:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -83.3519 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMUB2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TMUB2-1:5
4.1 lnc-TMUB2-1:5
5.0 lnc-TMUB2-1:5
5.1 lnc-DHX8-16:2
5.2 lnc-TMUB2-1:5