Transcript: lnc-TMX3-5:1

Basic information

LNCipedia transcript ID: lnc-TMX3-5:1 
LNCipedia gene ID: lnc-TMX3-5
Location (hg38): chr18:68486493-68488288
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 798 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1599_chr18:66153729-66155496_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.5433 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMX3-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMX3-5:1
4.0 lnc-TMX3-5:1
4.1 lnc-TMX3-5:1
5.0 lnc-TMX3-5:1
5.1 lnc-PQLC1-96:1
5.2 lnc-TMX3-5:1