Transcript: lnc-TNFRSF14-2:5

Basic information

LNCipedia transcript ID: lnc-TNFRSF14-2:5 
LNCipedia gene ID: lnc-TNFRSF14-2
Location (hg38): chr1:2583374-2584531
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 529 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT000469
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.6577 non-coding 
CPAT coding probability 14.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNFRSF14-2:5 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM213B-1:2
4.0 lnc-TNFRSF14-2:5
4.1 lnc-TNFRSF14-2:5
5.0 lnc-TNFRSF14-2:5
5.1 lnc-VAMP3-63:5
5.2 lnc-TNFRSF14-2:5