Transcript: lnc-TNFRSF21-4:3

Basic information

LNCipedia transcript ID: lnc-TNFRSF21-4:3 
LNCipedia gene ID: lnc-TNFRSF21-4
Location (hg38): chr6:47477243-47477625
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 383 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270761.1|ENST00000604014.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -222.5021 non-coding 
CPAT coding probability 8.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNFRSF21-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TNFRSF21-4:3
5.0 lnc-TNFRSF21-4:3
5.1 lnc-PGK2-16:2
5.2 lnc-TNFRSF21-4:3