Transcript: lnc-TNFSF4-3:2

Basic information

LNCipedia transcript ID: lnc-TNFSF4-3:2 
LNCipedia gene ID: lnc-TNFSF4-3
Location (hg38): chr1:173209709-173477140
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 32663 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203739.3|ENCT00000034496.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.3845 non-coding 
CPAT coding probability 96.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TNFSF4-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TNFSF4-3:2
5.0 lnc-TNFSF4-3:2
5.1 lnc-SH2D1B-118:2
5.2 lnc-TNFSF4-3:2