Transcript: lnc-TNPO3-12:2

Basic information

LNCipedia transcript ID: lnc-TNPO3-12:2 
LNCipedia gene ID: lnc-TNPO3-12
Location (hg38): chr7:128869230-128871340
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1555 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT123266
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.5184 non-coding 
CPAT coding probability 27.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TNPO3-12:2 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNPO3-6:2
4.0 lnc-TNPO3-6:2
4.1 lnc-TNPO3-1:36
5.0 lnc-TNPO3-1:36
5.1 lnc-UBE2H-16:2
5.2 lnc-TNPO3-12:2