Transcript: lnc-TOMM20-1:4

Basic information

LNCipedia transcript ID: lnc-TOMM20-1:4 
LNCipedia gene ID: lnc-TOMM20-1
Location (hg38): chr1:234980060-234980714
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 655 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT010332
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -212.2052 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TOMM20-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOMM20-1:4
4.0 lnc-TOMM20-1:4
4.1 lnc-TOMM20-1:4
5.0 lnc-TOMM20-1:4
5.1 lnc-SIPA1L2-42:8
5.2 lnc-TOMM20-1:4