Transcript: lnc-TOPBP1-4:1

Basic information

LNCipedia transcript ID: lnc-TOPBP1-4:1 
LNCipedia gene ID: lnc-TOPBP1-4
Location (hg38): chr3:133546071-133546272
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 202 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT092189
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.23 non-coding 
CPAT coding probability 53.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TOPBP1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOPBP1-4:1
4.0 lnc-TOPBP1-4:1
4.1 lnc-TOPBP1-4:1
5.0 lnc-TOPBP1-4:1
5.1 lnc-RYK-10:1
5.2 lnc-TOPBP1-4:1