Transcript: lnc-TOR3A-2:2

Basic information

LNCipedia transcript ID: lnc-TOR3A-2:2 
LNCipedia gene ID: lnc-TOR3A-2
Location (hg38): chr1:179174425-179175566
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 444 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT007852
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.5854 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TOR3A-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOR3A-2:2
4.0 lnc-TOR3A-2:2
4.1 lnc-TOR3A-2:2
5.0 lnc-TOR3A-2:2
5.1 lnc-SOAT1-5:2
5.2 lnc-TOR3A-2:2