Transcript: lnc-TP53-2:4

Basic information

LNCipedia transcript ID: lnc-TP53-2:4 
LNCipedia gene ID: lnc-TP53-2
Location (hg38): chr17:7717082-7717648
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 567 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000032962.1|FTMT26600000452.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -231.0604 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TP53-2:4
5.0 lnc-TP53-2:4
5.1 lnc-YBX2-19:4
5.2 lnc-TP53-2:4