Transcript: lnc-TP53BP2-8:8

Basic information

LNCipedia transcript ID: lnc-TP53BP2-8:8 
LNCipedia gene ID: lnc-TP53BP2-8
Location (hg38): chr1:223963606-223971768
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1129 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001838; NONHSAT009755
Alternative gene names: XLOC_001223; linc-TP53BP2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.2648 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53BP2-8:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TP53BP2-1:1
3.1 lnc-TP53BP2-1:1
4.0 lnc-TP53BP2-1:1
4.1 lnc-TP53BP2-3:11
5.0 lnc-TP53BP2-3:11
5.1 lnc-LEFTY2-37:8
5.2 lnc-TP53BP2-8:8