Transcript: lnc-TP53RK-1:2

Basic information

LNCipedia transcript ID: lnc-TP53RK-1:2 
LNCipedia gene ID: lnc-TP53RK-1
Location (hg38): chr20:46899445-46901748
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1416 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236028.1|MICT00000218955.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -249.9084 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53RK-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TP53RK-1:2
5.0 lnc-TP53RK-1:2
5.1 lnc-SULF2-26:1
5.2 lnc-TP53RK-1:2