Transcript: lnc-TP53TG3-168:1

Basic information

LNCipedia transcript ID: lnc-TP53TG3-168:1 
LNCipedia gene ID: lnc-TP53TG3-168
Location (hg38): chr16:33316511-33330342
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000569199.1; RP11-1437A8.6-001; OTTHUMT00000432118.1; NONHSAT142075
Alternative gene names: ENSG00000261507.1; RP11-1437A8.6; OTTHUMG00000176460.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.912 non-coding 
CPAT coding probability 3.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53TG3-168:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC136428.1.1-6:1
4.0 lnc-AC136428.1.1-6:1
4.1 lnc-AC136428.1.1-6:1
5.0 lnc-AC136428.1.1-6:1
5.1 lnc-SULT1A2-168:1
5.2 lnc-TP53TG3-168:1