Transcript: lnc-TP53TG3-168:2

Basic information

LNCipedia transcript ID: lnc-TP53TG3-168:2 
LNCipedia gene ID: lnc-TP53TG3-168
Ensembl Gene ID: ENSG00000261507
Ensembl Transcript ID: ENST00000569199
Location (hg38): chr16:33206431-33330342
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 540 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000569199.1
Alternative gene names: ENSG00000261507.1; RP11-1437A8.6; AC141257.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TP53TG3-168:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SULT1A2-168:2
5.1 lnc-SULT1A2-168:2
5.2 lnc-TP53TG3-168:2