Transcript: lnc-TP53TG3-26:1

Basic information

LNCipedia transcript ID: lnc-TP53TG3-26:1 
LNCipedia gene ID: lnc-TP53TG3-26
Ensembl Gene ID: ENSG00000260419
Ensembl Transcript ID: ENST00000569850
Location (hg38): chr16:33191561-33195354
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 262 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000569850.1
Alternative gene names: ENSG00000260419.1; RP11-1437A8.3; AC138869.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.605 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53TG3-26:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC136428.1.1-7:2
4.1 lnc-AC136428.1.1-7:2
5.0 lnc-AC136428.1.1-7:2
5.1 lnc-SULT1A2-165:1
5.2 lnc-TP53TG3-26:1