Transcript: lnc-TP53TG3-7:1

Basic information

LNCipedia transcript ID: lnc-TP53TG3-7:1 
LNCipedia gene ID: lnc-TP53TG3-7
Location (hg38): chr16:32250752-32257213
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3907 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024630; NONHSAT142000
Alternative gene names: XLOC_011918; linc-C16orf58-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 60.4382 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TP53TG3-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TP53TG3-3:1
3.1 lnc-TP53TG3-7:1
4.0 lnc-TP53TG3-7:1
4.1 lnc-TP53TG3-7:1
5.0 lnc-TP53TG3-7:1
5.1 lnc-SULT1A2-136:1
5.2 lnc-TP53TG3-7:1