Transcript: lnc-TP53TG3F-22:1

Basic information

LNCipedia transcript ID: lnc-TP53TG3F-22:1 
LNCipedia gene ID: lnc-TP53TG3F-22
Location (hg38): chr16:34143023-34143275
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 253 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT142130; FPKM1_group_11557_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.1958 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53TG3F-22:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2144E22.5.1-22:1
4.0 lnc-CTD-2144E22.5.1-22:1
4.1 lnc-CTD-2144E22.5.1-22:1
5.0 lnc-CTD-2144E22.5.1-22:1
5.1 lnc-ZNF646-107:1
5.2 lnc-TP53TG3F-22:1