Transcript: lnc-TPD52-3:4

Basic information

LNCipedia transcript ID: lnc-TPD52-3:4 
LNCipedia gene ID: lnc-TPD52-3
Location (hg38): chr8:80051544-80231232
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 585 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT127396
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.2156 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPD52-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPS28-3:2
4.0 lnc-TPD52-3:4
4.1 lnc-TPD52-3:4
5.0 lnc-TPD52-3:4
5.1 lnc-CPA6-135:2
5.2 lnc-TPD52-3:4