Transcript: lnc-TPD52-3:7

Basic information

LNCipedia transcript ID: lnc-TPD52-3:7 
LNCipedia gene ID: lnc-TPD52-3
Location (hg38): chr8:80177657-80218530
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 480 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT127401
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.432 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPD52-3:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPS28-3:5
4.0 lnc-TPD52-3:7
4.1 lnc-TPD52-3:7
5.0 lnc-TPD52-3:7
5.1 lnc-CPA6-135:5
5.2 lnc-TPD52-3:7