Transcript: lnc-TPP2-7:1

Basic information

LNCipedia transcript ID: lnc-TPP2-7:1 
LNCipedia gene ID: lnc-TPP2-7
Location (hg38): chr13:102219278-102225679
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 597 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_908_chr13:102871627-102878029_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.5309 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TPP2-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPP2-7:1
4.0 lnc-TPP2-7:1
4.1 lnc-TPP2-7:1
5.0 lnc-TPP2-7:1
5.1 lnc-COL4A2-69:1
5.2 lnc-TPP2-7:1