Transcript: lnc-TPRG1-1:3

Basic information

LNCipedia transcript ID: lnc-TPRG1-1:3 
LNCipedia gene ID: lnc-TPRG1-1
RefSeq ID: NR_024413
Location (hg38): chr3:188178543-188180808
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2266 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024413; NR_024413.1
Alternative gene names: FLJ42393


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.5802 non-coding 
CPAT coding probability 39.09% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TPRG1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC022498.1-1:1
4.0 lnc-AC022498.1-1:1
4.1 lnc-AC022498.1-1:1
5.0 lnc-AC022498.1-1:1
5.1 lnc-FAM131A-60:1
5.2 lnc-TPRG1-1:3