Transcript: lnc-TRABD2B-4:2

Basic information

LNCipedia transcript ID: lnc-TRABD2B-4:2 
LNCipedia gene ID: lnc-TRABD2B-4
Location (hg38): chr1:48096092-48127948
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT003118
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.6591 non-coding 
CPAT coding probability 2.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRABD2B-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-543D5.3.1-4:3
4.0 lnc-RP11-543D5.3.1-4:3
4.1 lnc-RP11-543D5.3.1-4:3
5.0 lnc-RP11-543D5.3.1-4:3
5.1 lnc-STIL-15:2
5.2 lnc-TRABD2B-4:2