Transcript: lnc-TRAM1-2:2

Basic information

LNCipedia transcript ID: lnc-TRAM1-2:2 
LNCipedia gene ID: lnc-TRAM1-2
Location (hg38): chr8:70640573-70644128
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 542 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT127173
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.2708 non-coding 
CPAT coding probability 3.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRAM1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRAM1-2:2
4.0 lnc-TRAM1-2:2
4.1 lnc-TRAM1-2:2
5.0 lnc-TRAM1-2:2
5.1 lnc-CPA6-61:2
5.2 lnc-TRAM1-2:2