Transcript: lnc-TRIM26-2:9
Basic information
LNCipedia transcript ID: lnc-TRIM26-2:9
HGNC Gene Symbol: lnc-TRIM26-2
HGNC Full Gene Name:
HLA complex group 17
Ensembl Gene ID:
ENSG00000270604
Ensembl Transcript ID:
ENST00000453558
RefSeq ID:
NR_052012
Location (hg38): chr6:30234039-30326134
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 732 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000453558; ENST00000453558.1; HCG17-002; OTTHUMT00000256054.1; NR_052012; NR_052012.1
Alternative gene names: ENSG00000242996; HCG17; ENSG00000242996.1; OTTHUMG00000031114.2; ENSG00000270604.1; ENSG00000270604.5
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-TRIM26-2:9 | no | no | no | no |
Available literature
- Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.
- Ning (2014), LincSNP: a database of linking disease-associated SNPs to human large intergenic non-coding RNAs., BMC Bioinformatics
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-TRIM26-1:9 |
| 3.1 | lnc-TRIM26-2:9 |
| 4.0 | lnc-TRIM26-2:9 |
| 4.1 | lnc-TRIM26-2:9 |
| 5.0 | lnc-TRIM26-2:9 |
| 5.1 | lnc-SFTA2-26:46 |
| 5.2 | lnc-TRIM26-2:9 |