Transcript: lnc-TRIM28-14:1

Basic information

LNCipedia transcript ID: lnc-TRIM28-14:1 
LNCipedia gene ID: lnc-TRIM28-14
Location (hg38): chr19:58559127-58560502
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1376 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267858.1|MICT00000182627.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -133.054 non-coding 
CPAT coding probability 2.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRIM28-14:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MZF1-AS1:9
5.0 MZF1-AS1:9
5.1 lnc-ZNF587B-58:1
5.2 lnc-TRIM28-14:1