Transcript: lnc-TRIM28-14:2

Basic information

LNCipedia transcript ID: lnc-TRIM28-14:2 
LNCipedia gene ID: lnc-TRIM28-14
Location (hg38): chr19:58559196-58582100
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1070 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267858.1|FTMT27500022683.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 339.3398 coding 
CPAT coding probability 11.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TRIM28-14:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MZF1-AS1:12
5.0 MZF1-AS1:12
5.1 lnc-ZNF587B-58:2
5.2 lnc-TRIM28-14:2